miRBase entry: lva-mir-33

Stem-loop lva-mir-33


Accession
MI0025143
Description
Lytechinus variegatus lva-mir-33 precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

cuuucuugaagccaugGUGCAUUGUAGUUGCAUUGCAUguuuuucuguagcaaauguagugcaaauacagugcaaaauggaggcaagau
...(((((...((((..(((((((((.((((((((((((((.......))))..)))))))))).)))))))))..))))...))))).

Structure
cuu     aag    gG         G          --    uu 
   ucuug   ccau  UGCAUUGUA UUGCAUUGCA  Uguu  u
   |||||   ||||  ||||||||| ||||||||||  ||||  c
   agaac   ggua  acgugacau aacgugaugu  acga  u
--u     gga    aa         a          aa    ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lva-miR-33-5p

Accession MIMAT0032198
Description Lytechinus variegatus lva-miR-33-5p mature miRNA
Sequence 17 - GUGCAUUGUAGUUGCAUUGCAU - 38
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374