Stem-loop lva-mir-34

Accession

MI0025144

Description

Lytechinus variegatus lva-mir-34 precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

ugauuggcugccuuccuUCGGCAGUGUAGUUAGCUGGUUGuuuuccaccaaucaucaaccagcuugcugcagggccccaggaaggagucuugaaauc
.....((((.(((((((..(((..((((((.(((((((((...............))))))))).))))))..)))..)))))))))))........

Structure

---ugauu    g       UC   AG      U         uuuucc 
        ggcu ccuuccu  GGC  UGUAGU AGCUGGUUG      a
        |||| |||||||  |||  |||||| |||||||||      c
        cuga ggaagga  ccg  acgucg ucgaccaac      c
cuaaaguu    -       cc   gg      u         uacuaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-34-5p

• Accession: MIMAT0032199
• Description: Lytechinus variegatus lva-miR-34-5p mature miRNA
• Sequence: 18 - UCGGCAGUGUAGUUAGCUGGUUG - 40
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374