Stem-loop lva-mir-153

Accession

MI0025154

Description

Lytechinus variegatus lva-mir-153 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

cccaccagcccgcucauuuuuguguuuaugcaacuuuugucucuugccgaucaguguagUUGCAUAGUCACAAAAGUGAUUgggaggguucgggcacuaac
((((((..((((.(((((((((((.((((((((((.(((((.......)).)))...)))))))))).))))))))))).))))..)))..))).......

Structure

-------   --   ag    c           u          --u   -  uc 
       ccc  acc  cccg ucauuuuugug uuaugcaacu   uug uc  u
       |||  |||  |||| ||||||||||| ||||||||||   ||| ||  u
       ggg  ugg  gggU AGUGAAAACAC GAUACGUUga   gac ag  g
caaucac   cu   ga    U           U          ugu   u  cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-153-3p

• Accession: MIMAT0032208
• Description: Lytechinus variegatus lva-miR-153-3p mature miRNA
• Sequence: 60 - UUGCAUAGUCACAAAAGUGAUU - 81
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374