Stem-loop lva-mir-200

Accession

MI0025159

Description

Lytechinus variegatus lva-mir-200 precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

uggugacaucauacuggacagcauuggacgugauuggaucguucucUAAUACUGUCUGGUGAUGAUGUUgacacuggcuuu
((..(((((((((((((((((.((((((..((((...))))...)))))).))))))))).))))))))..))........

Structure

--------  gu        -         c      -cg    u 
        ug  gacaucau acuggacag auugga   ugau  
        ||  |||||||| ||||||||| ||||||   |||| g
        ac  UUGUAGUA UGGUCUGUC UAAUcu   gcua  
uuucgguc  ag        G         A      cuu    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-200-3p

• Accession: MIMAT0032213
• Description: Lytechinus variegatus lva-miR-200-3p mature miRNA
• Sequence: 47 - UAAUACUGUCUGGUGAUGAUGUU - 69
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374