Stem-loop lva-mir-219

Accession

MI0025161

Description

Lytechinus variegatus lva-mir-219 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

ugcgaguguuauccguUGAUUGUCCGAACGCAAUUCUUGuugacuuuucauucacaaucaagaacuguguacggacaucagugguugauaccgcuuacacc
.(((.((((((.((((((((.(((((.(((((.(((((((((............))).)))))).))))).))))))))))))).))))))))).......

Structure

------u   a      u        U     A     A      -   acuuu 
       gcg guguua ccguUGAU GUCCG ACGCA UUCUUG uug     u
       ||| |||||| |||||||| ||||| ||||| |||||| |||      
       cgc cauagu ggugacua caggc ugugu aagaac aac     c
ccacauu   -      u        -     a     c      u   acuua 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-219-5p

• Accession: MIMAT0032215
• Description: Lytechinus variegatus lva-miR-219-5p mature miRNA
• Sequence: 17 - UGAUUGUCCGAACGCAAUUCUUG - 39
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374