Stem-loop lva-mir-278

Accession

MI0025165

Description

Lytechinus variegatus lva-mir-278 precursor miRNA

Gene family

MIPF0000155; mir-278

Sequence

aaacuaccucuucucuuggaaugaaagccucgccaaucugucauuguuacuaaacaaggUCGGUGGGACUUUCGUUCGACUagaagaaggcagauagua
...((.((((((((..(.(((((((((.((((((.((((.....((((....)))))))).)))))).))))))))).)..))))).))).))......

Structure

---aaa  a   -     cu g         c      a    gucau    a 
      cu ccu cuucu  u gaaugaaag cucgcc aucu     uguu c
      || ||| |||||  | ||||||||| |||||| ||||     ||||  
      ga gga gaaga  A CUUGCUUUC GGGUGG Ugga     acaa u
augaua  c   a     UC G         A      C    -----    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-278-3p

• Accession: MIMAT0032219
• Description: Lytechinus variegatus lva-miR-278-3p mature miRNA
• Sequence: 60 - UCGGUGGGACUUUCGUUCGACU - 81
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374