Stem-loop lva-mir-2003

Accession

MI0025170

Description

Lytechinus variegatus lva-mir-2003 precursor miRNA

Gene family

MIPF0002049; mir-2003

Sequence

gcugguuggccuaAACCCGUAAGGUCUUAACUUGUgcuggaguuacgaguacacagguuaugcccuuuggguaguaggccggacagauua
.(((..(((((((.(((((.((((.(.(((((((((((.(.....).))..))))))))).).)))))))))..)))))))..)))....

Structure

---g   gu       -A     U    U U         --  g a 
    cug  uggccua  ACCCG AAGG C UAACUUGUg  cu g g
    |||  |||||||  ||||| |||| | |||||||||  || | u
    gac  gccggau  ugggu uucc g auuggacac  ga c u
auua   ag       ga     -    c u         au  g a 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-2003-5p

• Accession: MIMAT0032224
• Description: Lytechinus variegatus lva-miR-2003-5p mature miRNA
• Sequence: 14 - AACCCGUAAGGUCUUAACUUGU - 35
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374