miRBase entry: lva-mir-2013

Stem-loop lva-mir-2013


Accession
MI0025180
Description
Lytechinus variegatus lva-mir-2013 precursor miRNA
Gene family
MIPF0001777; mir-2013


Sequence

ugucuucugcucuacgcugcuacaucuaguugcauugugacuucuguuucagggaaaUGCAGCAUGAUGUAGUGGUGUagcucagcaagacca
.((((((((..(((((((((((((((..(((((((((.(((....))).)).....)))))))..)))))))))))))))..))).)))))..

Structure
-u     -   cu               ua       -----  u   u 
  gucuu cug  cuacgcugcuacauc  guugcau     ug gac u
  ||||| |||  |||||||||||||||  |||||||     || |||  
  cagaa gac  gaUGUGGUGAUGUAG  CGACGUa     ac uug c
ac     c   uc               UA       aaggg  u   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lva-miR-2013-3p

Accession MIMAT0032234
Description Lytechinus variegatus lva-miR-2013-3p mature miRNA
Sequence 58 - UGCAGCAUGAUGUAGUGGUGU - 78
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374