miRBase entry: lva-mir-4850

Stem-loop lva-mir-4850


Accession
MI0025182
Description
Lytechinus variegatus lva-mir-4850 precursor miRNA
Gene family
MIPF0002086; mir-4850


Sequence

ugggaagaucauUUAUCAUGAUUGUAAGAGGAGGggcccaagaaucgauccuugagccacuccugugcugacauccaugacauuugacuuu
...((((.(((..(.(((((..(((.(((((((.(((.((((........)))).))).)))))...)).)))..))))).)..)))))))

Structure
ugg    a   uU A     AU   A  ---     G   c    aau 
   gaag uca  U UCAUG  UGU AG   AGGAG ggc caag   c
   |||| |||  | |||||  ||| ||   ||||| ||| ||||    
   uuuc agu  a aguac  aca uc   uccuc ccg guuc   g
---    -   uu c     cu   g  gug     a   a    cua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lva-miR-4850-5p

Accession MIMAT0032236
Description Lytechinus variegatus lva-miR-4850-5p mature miRNA
Sequence 13 - UUAUCAUGAUUGUAAGAGGAGG - 34
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374