Stem-loop mtr-MIR319c

Accession

MI0025219

Description

Medicago truncatula mtr-MIR319c precursor miRNA

Gene family

MIPF0001104; MIR319

Literature search

5 open access papers mention mtr-MIR319c
(16 sentences)

Sequence

cagaaaugGGAGUUCCUUGCAGCCCAAAGcgccaagugagaauucuacuggcaaauuauguuUUGGACUGAAGGGAGCUCCCAguucuu
.((((.((((((((((((.(((.(((((((((((.((((....)).)))))).......))))))).))).)))))))))))).)))).

Structure

c    a            G   C       -------    a  -  g 
 agaa ugGGAGUUCCUU CAG CCAAAGc       gcca gu ga a
 |||| |||||||||||| ||| |||||||       |||| || ||  
 ucuu ACCCUCGAGGGA GUC GGUUuug       cggu ca cu a
u    g            A   A       uauuaaa    -  u  u 

Annotation confidence Not enough data

Genome context

contig_50311: 658-746 [+]

Mature mtr-miR319c-5p

• Accession: MIMAT0029980
• Description: Medicago truncatula mtr-miR319c-5p mature miRNA
• Sequence: 9 - GGAGUUCCUUGCAGCCCAAAG - 29
• Evidence: experimental ; Illumina [1]

Mature mtr-miR319c-3p

• Accession: MIMAT0029981
• Description: Medicago truncatula mtr-miR319c-3p mature miRNA
• Sequence: 63 - UUGGACUGAAGGGAGCUCCCA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105