Stem-loop mtr-MIR7701

Accession

MI0025237

Description

Medicago truncatula mtr-MIR7701 precursor miRNA

Sequence

uggucuauauuaugaaucacauacaucAUUAAAUGAAUGAAUCUAAAAaguaaauuuuauuuauauuuaaaaacagagcguguggaucacaaaacacauuagcuaccaguuaaaaguccugaugacucgugaaguuuauucaacccagaccaguuggcaugggauauaaaugagugagagggggugaaccgacaagggaguaauggccacugcuauauaguacauaaaaugguucaagcuuuaaauuggcaugcuaguauauacucaauccguuuuaaaauauaaguaaauuuuaguuuUUAGGUUCAUUCAAUUAAUGAuguaugugguuuauaauaugaacca
((((.(((((((((((((((((((((((((((.((((((((((((((((.((((.(((((((((((((.(((((.((..((((..........))))((((((..((((((.((((((((..(.(((((((((.....)))..((((..((....))..))))......)))))).)..)))..(((((((......((.(((((((....))))).)).).)......))))))).))))).))))))...))))))..........)).))))).))))))))))))).)))).)))))))))))))))).))))))))))))))))))))))))))).))))

Structure

    c                           A                g    u             a     a  gcguguggaucacaaaacac      -ua      a     ccugaugacucgugaaguuuauucaacccagaccaguuggcaugggauauaaaugagugagaggggg       acaagg - g  -     c 
uggu uauauuaugaaucacauacaucAUUAA UGAAUGAAUCUAAAAa uaaa uuuauuuauauuu aaaac ga                    auuagc   ccaguu aaagu                                                                   ugaaccg      g a ua auggc a
|||| ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||| ||||| ||                    ||||||   |||||| |||||                                                                   |||||||      | | || |||||  
acca guauaauauuugguguauguAGUAAUU ACUUACUUGGAUUuuu auuu aaaugaauauaaa uuuug cu                    ugaucg   gguuaa uuucg                                                                   acuuggu      c u au uaucg c
    a                           A                g    u             a     c  ----------aacucauaua      uac      a     ------------------------------------------------------------------a       aaaaua a g  a     u 

Annotation confidence Not enough data

Genome context

chr8: 10522328-10522672 [-]

Mature mtr-miR7701-5p

• Accession: MIMAT0030015
• Description: Medicago truncatula mtr-miR7701-5p mature miRNA
• Sequence: 28 - AUUAAAUGAAUGAAUCUAAAA - 48
• Evidence: experimental ; Illumina [1]

Mature mtr-miR7701-3p

• Accession: MIMAT0030016
• Description: Medicago truncatula mtr-miR7701-3p mature miRNA
• Sequence: 300 - UUAGGUUCAUUCAAUUAAUGA - 320
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23572382
   microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
   "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
   "Planta (2013) 238:91-105