Stem-loop sequence oar-let-7a

AccessionMI0025243 (change log)
DescriptionOvis aries let-7a stem-loop
Gene family MIPF0000002; let-7
Literature search

16 open access papers mention oar-let-7a
(49 sentences)

Stem-loop
        u   gu                uuagggucacac 
5' uggga gag  aguagguuguauaguu            c
   ||||| |||  ||||||||||||||||            c
3' auccu uuc  ucaucuaacauaucaa            a
        -   ug                uagagggucgcc 
Get sequence
Deep sequencing
511417 reads, 1.49e+05 reads per million, 19 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Oar_v4.0; GCA_000298735.2) Overlapping transcripts
chr2: 27329964-27330043 [-]
intergenic
Clustered miRNAs
< 10kb from oar-let-7a
oar-let-7achr2: 27329964-27330043 [-]
oar-let-7dchr2: 27327398-27327484 [-]
Database links

Mature sequence oar-let-7a

Accession MIMAT0030022
Sequence

6 - 

ugagguaguagguuguauaguu

 - 27

Get sequence
Deep sequencing510038 reads, 19 experiments
Evidence experimental; cloned [1]

References

1
PMID:23269700 "MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200" Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E Physiol Genomics. 45:151-161(2013).