Stem-loop oar-mir-17

Accession

MI0025258

Description

Ovis aries oar-mir-17 precursor miRNA

Literature search

40 open access papers mention oar-mir-17
(118 sentences)

Sequence

258024 reads, 1284.0 reads per million, 143 experiments

gucagaauaauguCAAAGUGCUUACAGUGCAGGUAGugauuugugcaucuACUGCAGUGAAGGCACUUGUagcauuauggugac
((((..(((((((..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))...)))))))..))))

Structure

    ga       -CA        A  G     G   -  au 
guca  auaaugu   AAGUGCUU CA UGCAG UAG ug  u
||||  |||||||   |||||||| || ||||| ||| ||  u
cagu  uauuacg   UUCACGGA GU ACGUC Auc ac  g
    gg       aUG        A  G     -   u  gu 

Annotation confidence High

Genome context

chr10: 66141653-66141736 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-17

Mature oar-miR-17-5p

• Accession: MIMAT0030037
• Description: Ovis aries oar-miR-17-5p mature miRNA
• Sequence: 14 - CAAAGUGCUUACAGUGCAGGUAG - 36
• Evidence: experimental ; cloned [1]

Mature oar-miR-17-3p

• Accession: MIMAT0052528
• Description: Ovis aries oar-miR-17-3p mature miRNA
• Sequence: 51 - ACUGCAGUGAAGGCACUUGU - 70
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161