Stem-loop oar-mir-25

Accession

MI0025272

Description

Ovis aries oar-mir-25 precursor miRNA

Gene family

MIPF0000013; mir-25

Literature search

2 open access papers mention oar-mir-25
(2 sentences)

Sequence

8953 reads, 2184 reads per million, 13 experiments

ggccaguguugagaggcggagacuugggcaauugcuggacgcugccccgggcAUUGCACUUGUCUCGGUCUGAcagugccggcc
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))

Structure

    a      ag    g     uu g     ug    acg 
ggcc guguug  aggc gagac  g gcaau  cugg   c
|||| ||||||  |||| |||||  | |||||  ||||    
ccgg cgugac  UCUG CUCUG  C CGUUA  ggcc   u
    c      AG    G     UU A     cg    ccg 

Annotation confidence High

Genome context

chr24: 36244530-36244613 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oar-mir-25

Mature oar-miR-25

• Accession: MIMAT0030050
• Description: Ovis aries oar-miR-25 mature miRNA
• Sequence: 53 - AUUGCACUUGUCUCGGUCUGA - 73
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23269700
   MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
   "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
   "Physiol Genomics (2013) 45:151-161