miRBase entry: oar-mir-30d

Stem-loop oar-mir-30d


Accession
MI0025280
Description
Ovis aries oar-mir-30d precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
3 open access papers mention oar-mir-30d
(6 sentences)

Sequence

131669 reads, 28166 reads per million, 13 experiments
guuguUGUAAACAUCCCCGACUGGaagcuguaccacacagcuaagcuuucagucagauguuugcugcuac
...((.(((((((((...(((((((((((..............))))))))))).))))))))).))...

Structure
guu  U         CCC           guacca 
   gu GUAAACAUC   GACUGGaagcu      c
   || |||||||||   |||||||||||       
   cg cguuuguag   cugacuuucga      a
cau  u         --a           aucgac 


Annotation confidence Not enough data
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Genome context
chr9: 19937109-19937178 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oar-mir-30d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-30d

Accession MIMAT0030059
Description Ovis aries oar-miR-30d mature miRNA
Sequence 6 - UGUAAACAUCCCCGACUGG - 24
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161