Stem-loop ama-MIR156

Accession

MI0025286

Description

Avicennia marina ama-MIR156 precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

1 open access papers mention ama-MIR156
(16 sentences)

Sequence

uCUGACAGAAGAGAGUGAGCACauacgcaggugauuguaugcggugccauaccuuugcaggguuugugcucacuugucuucugucagu
.((((((((((((((((((((((.((.(..((((..(((((......)))))..)))).).)).))))))))))).))))))))))).

Structure

u           -           u  g ag    uu     cg 
 CUGACAGAAGA GAGUGAGCACa ac c  guga  guaug  g
 ||||||||||| ||||||||||| || |  ||||  |||||   
 gacugucuucu uucacucgugu ug g  cguu  cauac  u
u           g           u  g -a    uc     cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ama-miR156

• Accession: MIMAT0031153
• Description: Avicennia marina ama-miR156 mature miRNA
• Sequence: 2 - CUGACAGAAGAGAGUGAGCAC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23593307
   Identification and analysis of red sea mangrove (Avicennia marina) microRNAs by high-throughput sequencing and their association with stress responses
   Khraiwesh B, Pugalenthi G, Fedoroff NV
   PLoS One (2013) 8:e60774