Stem-loop bdi-MIR156g

Accession

MI0025292

Description

Brachypodium distachyon bdi-MIR156g precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

5 open access papers mention bdi-MIR156g
(26 sentences)

Sequence

cuuuggagguuUGACAGAAGAGAGUGAGCACacgcggugguuuccuagcaugcaggagccaugcugggagcugcgcguGCUCACCCUCUCUCUGUCAGCcguucaccaugc
...((((((((.((((((((((.((((((((.((((((....(((((((((((....).)))))))))))))))).)))))))).)))).)))))))))).))))......

Structure

---cuu    -    U      -    A        a      gguu          - a 
      ugga gguu GACAGA AGAG GUGAGCAC cgcggu    uccuagcaug c g
      |||| |||| |||||| |||| |||||||| ||||||    |||||||||| |  
      acuu cCGA CUGUCU UCUC CACUCGug gcgucg    agggucguac g g
cguacc    g    -      C    C        c      ----          c a 

Annotation confidence Not enough data

Genome context

2: 4030916-4031026 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bdi-MIR156g

Mature bdi-miR156g-5p

• Accession: MIMAT0030075
• Description: Brachypodium distachyon bdi-miR156g-5p mature miRNA
• Sequence: 12 - UGACAGAAGAGAGUGAGCAC - 31
• Evidence: experimental ; Illumina [1]

Mature bdi-miR156g-3p

• Accession: MIMAT0030076
• Description: Brachypodium distachyon bdi-miR156g-3p mature miRNA
• Sequence: 79 - GCUCACCCUCUCUCUGUCAGC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443