Stem-loop bdi-MIR156i

Accession

MI0025294

Description

Brachypodium distachyon bdi-MIR156i precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

5 open access papers mention bdi-MIR156i
(25 sentences)

Sequence

gucagaacggcUGACAGAAGAGAGUGAGCACacagcggcagccugcaucuggagcuaaagacgaugaugugucgaugcaugugaagaaggggaaaagagauaggcgcagcugcuguugcguGCUCACCCUCUCUCUGUCAGCucuccucucccc
........((((((((((((((.((((((((.((((((((((.(((.((((...((.....(..(.((((((....)))))).).....).....))...)))).))))))))))))).)))))))).)))).))))))))))...........

Structure

---gucagaac          -    A        a          c   a    gag  aaaga ---ga g      c 
           ggcUGACAGA AGAG GUGAGCAC cagcggcagc ugc ucug   cu     c     u augugu g
           |||||||||| |||| |||||||| |||||||||| ||| ||||   ||     |     | ||||||  
           uCGACUGUCU UCUC CACUCGug guugucgucg acg ggau   ga     g     a uguacg a
ccccucuccuc          C    C        c          -   c    aga  aaagg gaaga g      u 

Annotation confidence Not enough data

Genome context

4: 36168961-36169114 [+]

Mature bdi-miR156i-5p

• Accession: MIMAT0030079
• Description: Brachypodium distachyon bdi-miR156i-5p mature miRNA
• Sequence: 12 - UGACAGAAGAGAGUGAGCAC - 31
• Evidence: experimental ; Illumina [1]

Mature bdi-miR156i-3p

• Accession: MIMAT0030080
• Description: Brachypodium distachyon bdi-miR156i-3p mature miRNA
• Sequence: 122 - GCUCACCCUCUCUCUGUCAGC - 142
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443