Stem-loop bdi-MIR7719

Accession

MI0025330

Description

Brachypodium distachyon bdi-MIR7719 precursor miRNA

Sequence

aauucaacaucUCCGCCAUACAUGUUUCUAUCccaaucauauugcugaucuuugaagcuuggagccgguauguuggacuagacgaauuaagugccauaugauugugaUAGAAGCAUAUAUGGCGAAGAucuuaaauuga
((((.((.((((.(((((((.(((((((((((.(((((((((.(((.........)))........((((((((.(......).)))...)))))))))))))).))))))))))).))))))).)))).)).))))..

Structure

--    c  c    C       C           c         ugcugaucuuugaagcuuggagcc     ---   g ac 
  aauu aa aucU CGCCAUA AUGUUUCUAUC caaucauau                        gguau   guu g  u
  |||| || |||| ||||||| ||||||||||| |||||||||                        |||||   ||| |   
  uuaa uu uAGA GCGGUAU UACGAAGAUag guuaguaua                        ccgug   uaa c  a
ag    a  c    A       A           u         ------------------------     aau   g ag 

Annotation confidence Not enough data

Genome context

1: 40655242-40655380 [-]

Mature bdi-miR7719-5p

• Accession: MIMAT0030160
• Description: Brachypodium distachyon bdi-miR7719-5p mature miRNA
• Sequence: 12 - UCCGCCAUACAUGUUUCUAUC - 32
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7719-3p

• Accession: MIMAT0030161
• Description: Brachypodium distachyon bdi-miR7719-3p mature miRNA
• Sequence: 108 - UAGAAGCAUAUAUGGCGAAGA - 128
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443