miRBase entry: bdi-MIR7729a

Stem-loop bdi-MIR7729a


Accession
MI0025344
Description
Brachypodium distachyon bdi-MIR7729a precursor miRNA
Gene family
MIPF0001721; MIR7729


Sequence

cucgaucuacUGUUUUCAUAGGCCAUGUAGAGCuaauuuuguggugcaaaguuggAGCAAUGGUGGUGGUUUGGAGGAGuuuggaggugg
(((.(...(((.((((((...(((((...(..((((((((((...))))))))))..)....)))))....))))))))).).)))....

Structure
----   g ucu   G      -UAG     -GUA AG          g 
    cuc a   acU UUUUCA    GCCAU    G  Cuaauuuugu  
    ||| |   ||| ||||||    |||||    |  |||||||||| g
    gag u   uGA GGAGGU    UGGUG    C  gguugaaacg  
ggug   g --u   -      UUGG     GUAA GA          u 


Annotation confidence Not enough data
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Genome context
1: 19867091-19867180 [+]

Database links

Mature bdi-miR7729a-5p

Accession MIMAT0030190
Description Brachypodium distachyon bdi-miR7729a-5p mature miRNA
Sequence 11 - UGUUUUCAUAGGCCAUGUAGAGC - 33
Evidence experimental
Illumina [1]

Mature bdi-miR7729a-3p

Accession MIMAT0030191
Description Brachypodium distachyon bdi-miR7729a-3p mature miRNA
Sequence 56 - AGCAAUGGUGGUGGUUUGGAGGAG - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443