miRBase entry: bdi-MIR7732

Stem-loop bdi-MIR7732


Accession
MI0025348
Description
Brachypodium distachyon bdi-MIR7732 precursor miRNA


Sequence

acaugucgggUUCCUCCAAGAUCUCGGAGACUCggauucgggcggcggaauuuccggcuagccagucuccagaGAUCGAGAUCGUGGAGGAACCugauaacuucu
...(((((((((((((((.((((((((...((((((..(.((((.((((...)))).)..))).)..))).))).)))))))).)))))))))))))))......

Structure
---aca               A        AGA   -   uu g   -- g    a 
      ugucgggUUCCUCCA GAUCUCGG   CUC gga  c ggc  g cgga  
      ||||||||||||||| ||||||||   ||| |||  | |||  | |||| u
      auaguCCAAGGAGGU CUAGAGCU   Gag ccu  g ccg  c gccu  
ucuuca               G        --A   a   cu a   au g    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
3: 6980920-6981024 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR7732
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdi-miR7732-5p

Accession MIMAT0030198
Description Brachypodium distachyon bdi-miR7732-5p mature miRNA
Sequence 11 - UUCCUCCAAGAUCUCGGAGACUC - 33
Evidence experimental
Illumina [1]

Mature bdi-miR7732-3p

Accession MIMAT0030199
Description Brachypodium distachyon bdi-miR7732-3p mature miRNA
Sequence 74 - GAUCGAGAUCGUGGAGGAACC - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443