miRBase entry: bdi-MIR7741

Stem-loop bdi-MIR7741


Accession
MI0025359
Description
Brachypodium distachyon bdi-MIR7741 precursor miRNA


Sequence

agcuacauaauUUUUAAUUGUGGAAGCUCUUGAAGUUUCGCAUGCAGUuccucuauauuccugucugucaaguugagaucgcaacccugcacuggccaugcugccaccucgaggucacccaucauuugacucaucucaguucacUGCAUGUGGAACUUCCAGAUCUUCCAUGAGUAAAAAUccuguagcuuccaaggcaa
(((((((..(((((((.(((((((((.(((.(((((((((((((((((............(((...(((((((.((....(..(((.((...((((......))))...)).)))..)...)))))))))......)))...))))))))))))))))).))).))))))))).)))))))..)))))))..........

Structure
----------       ua       A         C   U                 uccucuauauuc   ---ucu       u  gauc ca   c  cac    ca 
          agcuaca  auUUUUA UUGUGGAAG UCU GAAGUUUCGCAUGCAGU            cug      gucaagu ga    g  acc ug   uggc  u
          |||||||  ||||||| ||||||||| ||| |||||||||||||||||            |||      ||||||| ||    |  ||| ||   ||||   
          ucgaugu  UAAAAAU AGUACCUUC AGA CUUCAAGGUGUACGUca            gac      caguuua cu    c  ugg gc   accg  g
aacggaaccu       cc       G         U   C                 ---------cuu   ucuacu       -  -acc ac   a  ucc    uc 


Annotation confidence Not enough data
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Genome context
1: 39792972-39793171 [+]

Database links

Mature bdi-miR7741-5p.1

Accession MIMAT0030220
Description Brachypodium distachyon bdi-miR7741-5p.1 mature miRNA
Sequence 12 - UUUUAAUUGUGGAAGCUCUUG - 32
Evidence experimental
Illumina [1]

Mature bdi-miR7741-5p.2

Accession MIMAT0030221
Description Brachypodium distachyon bdi-miR7741-5p.2 mature miRNA
Sequence 28 - UCUUGAAGUUUCGCAUGCAGU - 48
Evidence experimental
Illumina [1]

Mature bdi-miR7741-3p.2

Accession MIMAT0030222
Description Brachypodium distachyon bdi-miR7741-3p.2 mature miRNA
Sequence 145 - UGCAUGUGGAACUUCCAGAUC - 165
Evidence experimental
Illumina [1]

Mature bdi-miR7741-3p.1

Accession MIMAT0030223
Description Brachypodium distachyon bdi-miR7741-3p.1 mature miRNA
Sequence 161 - AGAUCUUCCAUGAGUAAAAAU - 181
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443