miRBase entry: bdi-MIR7771

Stem-loop bdi-MIR7771


Accession
MI0025393
Description
Brachypodium distachyon bdi-MIR7771 precursor miRNA


Sequence

uuugccgaggauuuacaacCCUUGACUCCUAUAGUACACAUUCccgauauugaaaaugucaaguaaauuaauuuaguaaaguuuugguauuuggaAUGUGUACUAUAGAAGUCAAGGGUuguaagcccuuugcaaau
(((((.((((.((((((((((((((((.((((((((((((((((.((((((((((....(((((......)))).).....)))))))))).)))))))))))))))).)))))))))))))))).)))).))))).

Structure
-     c    a                C                c          -augu -    aa 
 uuugc gagg uuuacaacCCUUGACU CUAUAGUACACAUUCc gauauugaaa     c aagu  a
 ||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||     | ||||   
 aaacg uucc gaauguUGGGAACUGA GAUAUCAUGUGUAagg uuaugguuuu     g uuua  u
u     u    c                A                u          gaaau a    au 


Annotation confidence Not enough data
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Genome context
1: 65106389-65106525 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR7771
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdi-miR7771-5p

Accession MIMAT0030292
Description Brachypodium distachyon bdi-miR7771-5p mature miRNA
Sequence 20 - CCUUGACUCCUAUAGUACACAUUC - 43
Evidence experimental
Illumina [1]

Mature bdi-miR7771-3p

Accession MIMAT0030293
Description Brachypodium distachyon bdi-miR7771-3p mature miRNA
Sequence 96 - AUGUGUACUAUAGAAGUCAAGGGU - 119
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23264558
    Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
    "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
    "Mol Plant (2013) 6:423-443