Stem-loop bdi-MIR7778

Accession

MI0025400

Description

Brachypodium distachyon bdi-MIR7778 precursor miRNA

Sequence

cgacggcaggGAGCAUCGUGUCGGCGUGCGCGGCggccaugggccucgucgcccuccucgccuagacgcccgguccgggccucaccgagaagcgcgauuauuuuacguggccgCUGCGCCGCGACUUUCGGACGAGcuguggucugu
.(((.((((......(((.((((.((.((((((((((((((......(((((.((.((((....((.(((((...))))).))..)))).)).))))).......))))))))))))))))))))...))).....)))).)))...

Structure

--c   g    gGAGCA   --U    G  U              -ggccuc     c  c    ccua  c     g 
   gac gcag      UCG   GUCG CG GCGCGGCggccaug       gucgc cu cucg    ga gcccg  
   ||| ||||      |||   |||| || ||||||||||||||       ||||| || ||||    || ||||| u
   cug uguc      GGC   CAGC GC CGCGUCgccggugc       uagcg ga gagc    cu cgggc  
ugu   g    -GAGCA   UUU    -  -              auuuuau     c  a    --ca  c     c 

Annotation confidence Not enough data

Genome context

1: 18369831-18369977 [+]

Mature bdi-miR7778-5p

• Accession: MIMAT0030310
• Description: Brachypodium distachyon bdi-miR7778-5p mature miRNA
• Sequence: 11 - GAGCAUCGUGUCGGCGUGCGCGGC - 34
• Evidence: experimental ; Illumina [1]

Mature bdi-miR7778-3p

• Accession: MIMAT0030311
• Description: Brachypodium distachyon bdi-miR7778-3p mature miRNA
• Sequence: 114 - CUGCGCCGCGACUUUCGGACGAG - 136
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23264558
   Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon
   "Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E"
   "Mol Plant (2013) 6:423-443