Stem-loop hhi-mir-1

Accession

MI0025426

Description

Hippoglossus hippoglossus hhi-mir-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Literature search

1 open access papers mention hhi-mir-1
(1 sentences)

Sequence

aagauuaccuccuuggugcacauacuucuuuauguacccauaugaacauaugauagcuaUGGAAUGUAAAGAAGUAUGUAUuccuggugaggugcg
.....((((((((.((...((((((((((((((((..(((((...............))))).))))))))))))))))...)).)).))))))..

Structure

aagau      -  u  ugc                ac     ugaaca 
     uaccuc cu gg   acauacuucuuuaugu  ccaua      u
     |||||| || ||   ||||||||||||||||  |||||      a
     guggag gg cc   UGUAUGAAGAAAUGUA  GGUau      u
---gc      u  u  uUA                -A     cgauag 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhi-miR-1

• Accession: MIMAT0030347
• Description: Hippoglossus hippoglossus hhi-miR-1 mature miRNA
• Sequence: 60 - UGGAAUGUAAAGAAGUAUGUAU - 81
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23626677
   Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
   Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
   PLoS One (2013) 8:e61378