Stem-loop hhi-mir-10d

Accession

MI0025427

Description

Hippoglossus hippoglossus hhi-mir-10d precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

2 open access papers mention hhi-mir-10d
(7 sentences)

Sequence

ugaagugagccgucgccuauauaUACCCUGUAGAACCGAAUGUGUGUGgagaugccucggucacagauuggguucuaggggagucuaugggcgaugacuaaccauc
....((.((.(((((((((((...(((((.(((((((.(((.(((((.(((....))).).)))).))).))))))).))).)).))))))))))).)).))....

Structure

ugaa  g  c           uaU  -   G       G   G    - G   a 
    gu ag cgucgccuaua   AC CCU UAGAACC AAU UGUG U gag u
    || || |||||||||||   || ||| ||||||| ||| |||| | |||  
    ca uc guagcggguau   ug ggg aucuugg uua acac g cuc g
cuac  a  a           --c  a   g       g   g    u g   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhi-miR-10d

• Accession: MIMAT0030348
• Description: Hippoglossus hippoglossus hhi-miR-10d mature miRNA
• Sequence: 24 - UACCCUGUAGAACCGAAUGUGUGUG - 48
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23626677
   Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
   Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
   PLoS One (2013) 8:e61378