miRBase entry: hhi-mir-129b

Stem-loop hhi-mir-129b


Accession
MI0025428
Description
Hippoglossus hippoglossus hhi-mir-129b precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

guccuuuguggguCUUUUUGCGGUCUGGGCUUGCUguuccuaaggcaguagccAGGAAGCCUUAACCCCAAAAAcguaaucugcacugga
.(((..((((((((((((((.(((..((((((.(((...(((......))).))).))))))..))).)))))).)..)))))))..)))

Structure
g   uu       -- -      C   CU      G   uuc   ag 
 ucc  ugugggu  C UUUUUG GGU  GGGCUU CUg   cua  g
 |||  |||||||  | |||||| |||  |||||| |||   |||   
 agg  acgucua  g AAAAAC CCA  UCCGAA GAc   gau  c
-   uc       au c      C   AU      G   --c   ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hhi-miR-129b-5p

Accession MIMAT0030349
Description Hippoglossus hippoglossus hhi-miR-129b-5p mature miRNA
Sequence 14 - CUUUUUGCGGUCUGGGCUUGCU - 35
Evidence experimental
SOLiD [1]

Mature hhi-miR-129b-3p

Accession MIMAT0030350
Description Hippoglossus hippoglossus hhi-miR-129b-3p mature miRNA
Sequence 54 - AGGAAGCCUUAACCCCAAAAA - 74
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23626677
    Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
    Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
    PLoS One (2013) 8:e61378