miRBase entry: hhi-mir-187

Stem-loop hhi-mir-187


Accession
MI0025434
Description
Hippoglossus hippoglossus hhi-mir-187 precursor miRNA
Gene family
MIPF0000078; mir-187


Sequence

gugaccucucuggccgggccaagggcugcaacacaggacauggguccugcucuccuccccgcUCGUGUCUUGUGUUGCAGCCaguggagcugccug
...........(((.(..(((..((((((((((((((((((((((...............))))))))))))))))))))))..)))..).)))..

Structure
gugaccucucu   c gg   ag                      ccugcu 
           ggc g  cca  ggcugcaacacaggacaugggu      c
           ||| |  |||  ||||||||||||||||||||||      u
           ccg c  ggu  CCGACGUUGUGUUCUGUGCUcg      c
---------gu   u ga   ga                      ccccuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hhi-miR-187

Accession MIMAT0030356
Description Hippoglossus hippoglossus hhi-miR-187 mature miRNA
Sequence 63 - UCGUGUCUUGUGUUGCAGCC - 82
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23626677
    Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
    Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
    PLoS One (2013) 8:e61378