Stem-loop hhi-mir-301

Accession

MI0025441

Description

Hippoglossus hippoglossus hhi-mir-301 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

guuuucagcuauuugcaggugcucugacuuuguugcacuacuguaucagacagcuagCAGUGCAAUAGUAUUGUCAAAGCAucuagaaaacagcagugac
((((((.((.....))(((((((.((((.((((((((((.((((........)).)).))))))))))....)))).))))))).)))))).........

Structure

---------      agcuauuugc       c    ---u          a  -  auc 
         guuuuc          aggugcu ugac    uuguugcacu cu gu   a
         ||||||          ||||||| ||||    |||||||||| || ||    
         caaaag          ucuACGA ACUG    GAUAACGUGA ga cg   g
cagugacga      ---------a       A    UUAU          C  u  aca 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhi-miR-301

• Accession: MIMAT0030362
• Description: Hippoglossus hippoglossus hhi-miR-301 mature miRNA
• Sequence: 58 - CAGUGCAAUAGUAUUGUCAAAGCA - 81
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23626677
   Characterization of novel precursor miRNAs using next generation sequencing and prediction of miRNA targets in Atlantic halibut
   Bizuayehu TT, Fernandes JM, Johansen SD, Babiak I
   PLoS One (2013) 8:e61378