Stem-loop rgl-MIR7807b

Accession

MI0025466

Description

Rehmannia glutinosa rgl-MIR7807b precursor miRNA

Gene family

MIPF0002091; MIR7807

Sequence

aaaaauaguccagUAACUAUAUGAAAAUCUCAAUUuuguuccuaauuucaccggaaauuuggaacuacacaugccaucacgugauugaaauaggaugaaauuaguaccaaaaUUGAGAUUUUCAUAUAGUUACUguacuauuuu
.((((((((.((((((((((((((((((((((((((((...(((((((((((....((((.((....(((.((....)).))).)).)))).)).)))))))))...)))))))))))))))))))))))))))).))))))))

Structure

a        c                            uuc         -  ggaa    g  acua   a  c 
 aaaauagu cagUAACUAUAUGAAAAUCUCAAUUuug   cuaauuuca cc    auuu ga    cac ug c
 |||||||| ||||||||||||||||||||||||||||   ||||||||| ||    |||| ||    ||| ||  
 uuuuauca gUCAUUGAUAUACUUUUAGAGUUaaaac   gauuaaagu gg    uaaa uu    gug ac a
-        u                            cau         a  ---a    g  ---a   c  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature rgl-miR7807b-5p

• Accession: MIMAT0032258
• Description: Rehmannia glutinosa rgl-miR7807b-5p mature miRNA
• Sequence: 14 - UAACUAUAUGAAAAUCUCAAUU - 35
• Evidence: experimental ; Illumina [1]

Mature rgl-miR7807b-3p

• Accession: MIMAT0032259
• Description: Rehmannia glutinosa rgl-miR7807b-3p mature miRNA
• Sequence: 113 - UUGAGAUUUUCAUAUAGUUACU - 134
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23861915
   Transcriptome/degradome-wide identification of R. glutinosa miRNAs and their targets: the role of miRNA activity in the replanting disease
   Li MJ, Yang YH, Chen XJ, Wang FQ, Lin WX, Yi YJ, Zeng L, Yang SY, Zhang ZY
   PLoS One (2013) 8:e68531