miRBase entry: ptc-MIR7834

Stem-loop ptc-MIR7834


Accession
MI0025506
Description
Populus trichocarpa ptc-MIR7834 precursor miRNA


Sequence

agccaaaaguUAAUAAAAUCUCGACUAUUAUcuaaaaucucgacuacuucuucguuuuuuuuuagauaauagucgagauuuuauuaauuuuuggga
..(((((((((((((((((((((((((((((((((((...(((........))).....)))))))))))))))))))))))))))))))))))..

Structure
ag                                   --ucu   cua 
  ccaaaaguUAAUAAAAUCUCGACUAUUAUcuaaaa     cga   c
  |||||||||||||||||||||||||||||||||||     |||    
  gguuuuuaauuauuuuagagcugauaauagauuuu     gcu   u
ag                                   uuuuu   ucu 


Annotation confidence Not enough data
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Genome context
CM000347.2: 535912-536007 [-]

Database links

Mature ptc-miR7834

Accession MIMAT0030406
Description Populus trichocarpa ptc-miR7834 mature miRNA
Sequence 11 - UAAUAAAAUCUCGACUAUUAU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23570526
    Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
    Shuai P, Liang D, Zhang Z, Yin W, Xia X
    BMC Genomics (2013) 14:233