Stem-loop ptc-MIR7835

Accession

MI0025507

Description

Populus trichocarpa ptc-MIR7835 precursor miRNA

Sequence

cccaaaaucgcuuuucaaagaaucucaaccauuggauuugugugaccccggugggauccacucauucaaugGAUGGGAUUUUUCGGGAAGUGauuucgagga
(((.((((((((((((.((((((((((.(((((((((..(((.(((((....))).)))))..))))))))).)))))))))).)))))))))))).).)).

Structure

-  - a            a          a         uu   u  -   c 
 cc c aaaucgcuuuuc aagaaucuca ccauuggau  gug ga ccc g
 || | |||||||||||| |||||||||| |||||||||  ||| || |||  
 gg g uuuaGUGAAGGG UUUUUAGGGU Gguaacuua  cac cu ggg g
a  a c            C          A         cu   -  a   u 

Annotation confidence Not enough data

Genome context

CM000346.2: 17756662-17756763 [+]

Mature ptc-miR7835

• Accession: MIMAT0030407
• Description: Populus trichocarpa ptc-miR7835 mature miRNA
• Sequence: 72 - GAUGGGAUUUUUCGGGAAGUG - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233