miRBase entry: rno-mir-155

Stem-loop rno-mir-155


Accession
MI0025509
Description
Rattus norvegicus rno-mir-155 precursor miRNA
Gene family
MIPF0000157; mir-155

Literature search
81 open access papers mention rno-mir-155
(444 sentences)

Sequence

15354 reads, 33 reads per million, 476 experiments
cugUUAAUGCUAAUUGUGAUAGGGGUuuuggccucugacugaCUCCUACCUGUUAGCAUUAACag
((((((((((((((.(.(.((((((((..(........).)))))))))).))))))))))))))

Structure
              U U A        uu gcc 
cugUUAAUGCUAAU G G UAGGGGUu  g   u
|||||||||||||| | | ||||||||  |    
gaCAAUUACGAUUG C C AUCCUCag  c   c
              U - -        -u agu 


Annotation confidence High
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Genome context
chr11: 24176603-24176667 [+]

Database links

Mature rno-miR-155-5p

Accession MIMAT0030409
Description Rattus norvegicus rno-miR-155-5p mature miRNA
Sequence 4 - UUAAUGCUAAUUGUGAUAGGGGU - 26
Evidence not_experimental

Mature rno-miR-155-3p

Accession MIMAT0030410
Description Rattus norvegicus rno-miR-155-3p mature miRNA
Sequence 43 - CUCCUACCUGUUAGCAUUAAC - 63
Evidence not_experimental

References

  1. PubMed ID: 23329697
    Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
    "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
    "RNA (2013) 19:365-379