Stem-loop bta-mir-2285aa

Accession

MI0025530

Description

Bos taurus bta-mir-2285aa precursor miRNA

Literature search

11 open access papers mention bta-mir-2285aa
(15 sentences)

Sequence

293466 reads, 64.0 reads per million, 317 experiments

CAAAAAGUUCGUCCAGAUUUUUccauaagauguuacagaAAAACUGGAACGAACUUUUGGGC
..((((((((((((((.((((((..(((....)))..)))))))))).))))))))))....

Structure

--CA          -    A      ca   g 
    AAAAGUUCGU CCAG UUUUUc  uaa a
    |||||||||| |||| ||||||  |||  
    UUUUCAAGCA GGUC AAAAag  auu u
CGGG          A    -      ac   g 

Annotation confidence High

Genome context

2: 5273102-5273163 [+]

Mature bta-miR-2285aa-5p

• Accession: MIMAT0051048
• Description: Bos taurus bta-miR-2285aa-5p mature miRNA
• Sequence: 1 - CAAAAAGUUCGUCCAGAUUUUU - 22
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285aa-3p

• Accession: MIMAT0030435
• Description: Bos taurus bta-miR-2285aa-3p mature miRNA
• Sequence: 40 - AAAACUGGAACGAACUUUUGGGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23472090
   Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
   Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
   PLoS One (2013) 8:e57543