miRBase entry: bta-mir-7862

Stem-loop bta-mir-7862


Accession
MI0025537
Description
Bos taurus bta-mir-7862 precursor miRNA


Sequence

35 reads, 5 reads per million, 21 experiments
cacagcuccaggggacgccguuccuguccuggacuaugugagUGGUGCUCCCUGGAGCUGAGC
..((((((((((((.(((((((((.(((...)))...).)))))))).))))))))))))...

Structure
-ca            a        - --u   c 
   cagcuccagggg cgccguuc c   guc  
   |||||||||||| |||||||| |   ||| u
   GUCGAGGUCCCU GUGGUgag g   cag  
CGA            C        u uau   g 


Annotation confidence Not enough data
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Genome context
chr9: 61750313-61750375 [-]

Database links

Mature bta-miR-7862

Accession MIMAT0030442
Description Bos taurus bta-miR-7862 mature miRNA
Sequence 43 - UGGUGCUCCCUGGAGCUGAGC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23472090
    Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
    Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
    PLoS One (2013) 8:e57543