miRBase entry: bta-mir-219-2

Stem-loop bta-mir-219-2


Accession
MI0025539
Description
Bos taurus bta-mir-219-2 precursor miRNA
Gene family
MIPF0000044; mir-219

Literature search
4 open access papers mention bta-mir-219-2
(8 sentences)

Sequence

347 reads, 13 reads per million, 61 experiments
ugauuguccaaacgcaauucucgagucucuagcucuggccgAGAGUUGAGUCUGGACGUCCCG
.(((.(((((.((.(((((((((.(((.........)))))))))))).)).))))))))...

Structure
--u   u     a  g         a   ucu 
   gau gucca ac caauucucg guc   a
   ||| ||||| || ||||||||| |||   g
   CUG CAGGU UG GUUGAGAgc cgg   c
GCC   -     C  A         -   ucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bta-miR-219

Accession MIMAT0030444
Description Bos taurus bta-miR-219 mature miRNA
Sequence 42 - AGAGUUGAGUCUGGACGUCCCG - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23472090
    Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
    Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
    PLoS One (2013) 8:e57543