miRBase entry: bta-mir-7865

Stem-loop bta-mir-7865


Accession
MI0025545
Description
Bos taurus bta-mir-7865 precursor miRNA


Sequence

30 reads, 6 reads per million, 19 experiments
CAGGGAGGGCAGGGGAGGGaggcugugugcaggccugcccugacugccgccccccgcagg
..(((..(((((...(((((((((.......))))).))))..)))))..))).......

Structure
-----CA   AG     GGG    -     gu 
       GGG  GGCAG   AGGG aggcu  g
       |||  |||||   |||| |||||  u
       ccc  ccguc   uccc uccgg  g
ggacgcc   cg     -ag    g     ac 


Annotation confidence Not enough data
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Genome context
chr18: 62973115-62973174 [+]

Database links

Mature bta-miR-7865

Accession MIMAT0030450
Description Bos taurus bta-miR-7865 mature miRNA
Sequence 1 - CAGGGAGGGCAGGGGAGGG - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23472090
    Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection
    Lawless N, Foroushani AB, McCabe MS, O'Farrelly C, Lynn DJ
    PLoS One (2013) 8:e57543