Stem-loop prd-mir-86

Accession

MI0025554

Description

Panagrellus redivivus prd-mir-86 precursor miRNA

Gene family

MIPF0000247; mir-86

Sequence

UAAGUGAAUGCUUUGCCACAGUCUuagaaacugcauuaagCUGGGCUGGGGUUCGCUUAAGC
(((((((((.((..(((.(((.(((((........))))))))))).)).)))))))))...

Structure

---         G  UU   A   U     aaa 
   UAAGUGAAU CU  GCC CAG CUuag   c
   ||||||||| ||  ||| ||| |||||    
   AUUCGCUUG GG  CGG GUC gaauu   u
CGA         G  -U   -   -     acg 

Annotation confidence Not enough data

Genome context

KB455443.1: 517726-517787 [-]

Mature prd-miR-86-5p

• Accession: MIMAT0030466
• Description: Panagrellus redivivus prd-miR-86-5p mature miRNA
• Sequence: 1 - UAAGUGAAUGCUUUGCCACAGUCU - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-86-3p

• Accession: MIMAT0030467
• Description: Panagrellus redivivus prd-miR-86-3p mature miRNA
• Sequence: 41 - CUGGGCUGGGGUUCGCUUAAGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295