Stem-loop prd-mir-7868

Accession

MI0025559

Description

Panagrellus redivivus prd-mir-7868 precursor miRNA

Sequence

UCUUUGGUCGUUUAGCAACGUUAUuuuggauuaauauAACUGUUAAACGCCUAAGGU
.((((((.(((((((((..(((((.(((...))).)))))))))))))).)))))).

Structure

U      U         AC     u   g 
 CUUUGG CGUUUAGCA  GUUAU uug  
 |||||| |||||||||  ||||| ||| a
 GGAAUC GCAAAUUGU  CAAua aau  
U      C         --     u   u 

Annotation confidence Not enough data

Genome context

KB455517.1: 651529-651585 [+]

Mature prd-miR-7868-5p

• Accession: MIMAT0030476
• Description: Panagrellus redivivus prd-miR-7868-5p mature miRNA
• Sequence: 1 - UCUUUGGUCGUUUAGCAACGUUAU - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7868-3p

• Accession: MIMAT0030477
• Description: Panagrellus redivivus prd-miR-7868-3p mature miRNA
• Sequence: 38 - AACUGUUAAACGCCUAAGGU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295