Stem-loop prd-mir-7870

Accession

MI0025563

Description

Panagrellus redivivus prd-mir-7870 precursor miRNA

Sequence

CGGUACUUUGUGGAAUGCAUGAGucgaagcauaguauacuCAUGCAAUCCAUUCAGUGUUGC
(((((((..(((((.(((((((((.............))))))))).)))))..))))))).

Structure

-       UU     A         cgaag 
 CGGUACU  GUGGA UGCAUGAGu     c
 |||||||  ||||| |||||||||     a
 GUUGUGA  UACCU ACGUACuca     u
C       CU     A         uauga 

Annotation confidence Not enough data

Genome context

KB455543.1: 82750-82811 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7870

Mature prd-miR-7870-5p

• Accession: MIMAT0030484
• Description: Panagrellus redivivus prd-miR-7870-5p mature miRNA
• Sequence: 1 - CGGUACUUUGUGGAAUGCAUGAG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7870-3p

• Accession: MIMAT0030485
• Description: Panagrellus redivivus prd-miR-7870-3p mature miRNA
• Sequence: 41 - CAUGCAAUCCAUUCAGUGUUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295