Stem-loop prd-mir-9a

Accession

MI0025571

Description

Panagrellus redivivus prd-mir-9a precursor miRNA

Sequence

UCUUUGGUUGCGUAGCUUAUUGacagcccuccguaauugauucAUAAAGCUAGGCGACUGAAGCA
.((((((((((.((((((..(((..................)))..)))))).))))))))))..

Structure

-U          G      AU   cagcccuc 
  CUUUGGUUGC UAGCUU  UGa        c
  |||||||||| ||||||  |||         
  GAAGUCAGCG AUCGAA  Acu        g
AC          G      AU   uaguuaau 

Annotation confidence Not enough data

Genome context

KB455458.1: 60717-60781 [-]

Mature prd-miR-9a-5p

• Accession: MIMAT0030500
• Description: Panagrellus redivivus prd-miR-9a-5p mature miRNA
• Sequence: 1 - UCUUUGGUUGCGUAGCUUAUUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-9a-3p

• Accession: MIMAT0030501
• Description: Panagrellus redivivus prd-miR-9a-3p mature miRNA
• Sequence: 44 - AUAAAGCUAGGCGACUGAAGCA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295