Stem-loop prd-mir-1175

Accession

MI0025572

Description

Panagrellus redivivus prd-mir-1175 precursor miRNA

Sequence

AAGUGAAGAGAAGAAUCUGACUguuuuuaacgauacuagUGAGAUUCUUACAUCUUCAUUU
((((((((((((((((((.(((((..........)).))).)))))))).).)))))))))

Structure

         - -        G   -  uuuu 
AAGUGAAGA G AAGAAUCU ACU gu    a
||||||||| | |||||||| ||| ||     
UUUACUUCU C UUCUUAGA Uga ca    a
         A A        G   u  uagc 

Annotation confidence Not enough data

Genome context

KB455565.1: 605914-605974 [-]

Mature prd-miR-1175-5p

• Accession: MIMAT0030502
• Description: Panagrellus redivivus prd-miR-1175-5p mature miRNA
• Sequence: 1 - AAGUGAAGAGAAGAAUCUGACU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-1175-3p

• Accession: MIMAT0030503
• Description: Panagrellus redivivus prd-miR-1175-3p mature miRNA
• Sequence: 40 - UGAGAUUCUUACAUCUUCAUUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295