Stem-loop prd-mir-7879

Accession

MI0025578

Description

Panagrellus redivivus prd-mir-7879 precursor miRNA

Sequence

AAUGUGAACGAGCAACAAAACGuggauugauacuauccgUUUUGUUCGCUAGUUUGCGUC
.((((((((.(((((((((((..((((.......)))))))))))).))).)))))))).

Structure

A        G   -        Gu    ug 
 AUGUGAAC AGC AACAAAAC  ggau  a
 |||||||| ||| ||||||||  ||||  u
 UGCGUUUG UCG UUGUUUUg  ccua  a
C        A   C        --    uc 

Annotation confidence Not enough data

Genome context

KB455554.1: 13930-13989 [+]

Mature prd-miR-7879-5p

• Accession: MIMAT0030514
• Description: Panagrellus redivivus prd-miR-7879-5p mature miRNA
• Sequence: 1 - AAUGUGAACGAGCAACAAAACG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7879-3p

• Accession: MIMAT0030515
• Description: Panagrellus redivivus prd-miR-7879-3p mature miRNA
• Sequence: 40 - UUUUGUUCGCUAGUUUGCGUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295