Stem-loop prd-mir-7881

Accession

MI0025581

Description

Panagrellus redivivus prd-mir-7881 precursor miRNA

Sequence

UGAUCCCUUUCUUUUUUUGGCacuauuguugauuugCCAAAGGAAGAACGGGGUUGU
.((((((.((((((((((((((............)))))))))))))).))))))..

Structure

-U      U              cuauu 
  GAUCCC UUCUUUUUUUGGCa     g
  |||||| ||||||||||||||      
  UUGGGG AAGAAGGAAACCgu     u
UG      C              uuagu 

Annotation confidence Not enough data

Genome context

KB455127.1: 278420-278476 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from prd-mir-7881

Mature prd-miR-7881-5p

• Accession: MIMAT0030520
• Description: Panagrellus redivivus prd-miR-7881-5p mature miRNA
• Sequence: 1 - UGAUCCCUUUCUUUUUUUGGC - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7881-3p

• Accession: MIMAT0030521
• Description: Panagrellus redivivus prd-miR-7881-3p mature miRNA
• Sequence: 37 - CCAAAGGAAGAACGGGGUUGU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295