Stem-loop prd-mir-7883a

Accession

MI0025584

Description

Panagrellus redivivus prd-mir-7883a precursor miRNA

Gene family

MIPF0001849; mir-7883

Sequence

AUUUGAGUCCACGAUGCACCUUGuaacgguaauucaAGGUACACCGUGAACUCAAAU
((((((((.((((.((.((((((...........)))))).)).)))).))))))))

Structure

        C    A  C      uaac 
AUUUGAGU CACG UG ACCUUG    g
|||||||| |||| || ||||||    g
UAAACUCA GUGC AC UGGAac    u
        A    C  A      uuaa 

Annotation confidence Not enough data

Genome context

KB455460.1: 1965687-1965743 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7883a

Mature prd-miR-7883a-5p

• Accession: MIMAT0030526
• Description: Panagrellus redivivus prd-miR-7883a-5p mature miRNA
• Sequence: 1 - AUUUGAGUCCACGAUGCACCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7883a-3p

• Accession: MIMAT0030527
• Description: Panagrellus redivivus prd-miR-7883a-3p mature miRNA
• Sequence: 37 - AGGUACACCGUGAACUCAAAU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295