Stem-loop prd-mir-7883b

Accession

MI0025585

Description

Panagrellus redivivus prd-mir-7883b precursor miRNA

Gene family

MIPF0001849; mir-7883

Sequence

AUUUGAGUCCACGAUGCACCUUGuaacgguaauucaAGGUGCACCGUGAACUCAAAUAU
((((((((.((((.(((((((((...........))))))))).)))).))))))))..

Structure

--        C    A         uaac 
  AUUUGAGU CACG UGCACCUUG    g
  |||||||| |||| |||||||||    g
  UAAACUCA GUGC ACGUGGAac    u
UA        A    C         uuaa 

Annotation confidence Not enough data

Genome context

KB455370.1: 23039-23097 [+]

Mature prd-miR-7883b-5p

• Accession: MIMAT0030528
• Description: Panagrellus redivivus prd-miR-7883b-5p mature miRNA
• Sequence: 1 - AUUUGAGUCCACGAUGCACCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7883b-3p

• Accession: MIMAT0030529
• Description: Panagrellus redivivus prd-miR-7883b-3p mature miRNA
• Sequence: 37 - AGGUGCACCGUGAACUCAAAUAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295