Stem-loop prd-mir-7886

Accession

MI0025592

Description

Panagrellus redivivus prd-mir-7886 precursor miRNA

Sequence

CGGCGCAUCAUUUUGACUCAUUuuuugcuucauuaaagUUAGUCAUCAGGAUGCGUCGUU
(((((((((....(((((.(((((..........))))).)))))....)))))))))..

Structure

--         AUUU     C     uugc 
  CGGCGCAUC    UGACU AUUuu    u
  |||||||||    ||||| |||||     
  GCUGCGUAG    ACUGA Ugaaa    u
UU         GACU     U     uuac 

Annotation confidence Not enough data

Genome context

KB455423.1: 283940-283999 [-]

Mature prd-miR-7886-5p

• Accession: MIMAT0030542
• Description: Panagrellus redivivus prd-miR-7886-5p mature miRNA
• Sequence: 1 - CGGCGCAUCAUUUUGACUCAUU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7886-3p

• Accession: MIMAT0030543
• Description: Panagrellus redivivus prd-miR-7886-3p mature miRNA
• Sequence: 39 - UUAGUCAUCAGGAUGCGUCGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295