Stem-loop prd-mir-7891

Accession

MI0025603

Description

Panagrellus redivivus prd-mir-7891 precursor miRNA

Sequence

AUAGUCCAUAACUGCCAUCcaguggaucgaagcaaUGGCAGUGUUGCACUUUGGUUU
..(((.((..((((((((...((........)).))))))))..)).))).......

Structure

-----AU   C  UA        Cca  gga 
       AGU CA  ACUGCCAU   gu   u
       ||| ||  ||||||||   ||    
       UCA GU  UGACGGUa   cg   c
UUUGGUU   C  UG        --a  aag 

Annotation confidence Not enough data

Genome context

KB455218.1: 19621-19677 [+]

Mature prd-miR-7891-5p

• Accession: MIMAT0030564
• Description: Panagrellus redivivus prd-miR-7891-5p mature miRNA
• Sequence: 1 - AUAGUCCAUAACUGCCAUC - 19
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7891-3p

• Accession: MIMAT0030565
• Description: Panagrellus redivivus prd-miR-7891-3p mature miRNA
• Sequence: 36 - UGGCAGUGUUGCACUUUGGUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295