miRBase entry: prd-mir-7896

Stem-loop prd-mir-7896


Accession
MI0025612
Description
Panagrellus redivivus prd-mir-7896 precursor miRNA


Sequence

GUGAGCCGUACUUGGACUAGUAAaaauuaguuuuuuUACUAAACAUUUAUGGUUCUAG
..((((((((..((...(((((((((......)))))))))..))..))))))))...

Structure
-GU        CU  GAC         uu 
   GAGCCGUA  UG   UAGUAAaaa  a
   ||||||||  ||   |||||||||   
   CUUGGUAU  AC   AUCAUuuuu  g
GAU        UU  -AA         uu 


Annotation confidence Not enough data
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Genome context
KB455532.1: 869372-869429 [+]

Database links

Mature prd-miR-7896-5p

Accession MIMAT0030582
Description Panagrellus redivivus prd-miR-7896-5p mature miRNA
Sequence 1 - GUGAGCCGUACUUGGACUAGUAA - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7896-3p

Accession MIMAT0030583
Description Panagrellus redivivus prd-miR-7896-3p mature miRNA
Sequence 37 - UACUAAACAUUUAUGGUUCUAG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295