Stem-loop prd-mir-7897

Accession

MI0025614

Description

Panagrellus redivivus prd-mir-7897 precursor miRNA

Sequence

uACCAGUUUAAACUUCGACUCAUCucaaaucagucuauaaaugagAAGAUCGUUGUUUAAACGCGGGAUu
..((.((((((((..(((.((.(((((..............))))).)))))..))))))))..))....

Structure

--uA  -A        UU   C  A     aaucag 
    CC  GUUUAAAC  CGA UC UCuca      u
    ||  ||||||||  ||| || |||||       
    GG  CAAAUUUG  GCU AG Agagu      c
uUAG  CG        UU   -  A     aaauau 

Annotation confidence Not enough data

Genome context

KB455481.1: 261949-262018 [-]

Mature prd-miR-7897-5p

• Accession: MIMAT0030586
• Description: Panagrellus redivivus prd-miR-7897-5p mature miRNA
• Sequence: 2 - ACCAGUUUAAACUUCGACUCAUC - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7897-3p

• Accession: MIMAT0030587
• Description: Panagrellus redivivus prd-miR-7897-3p mature miRNA
• Sequence: 46 - AAGAUCGUUGUUUAAACGCGGGAU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295